Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803827.1_cds_XP_016486261.1_7672
CDS Infomation

[gene=LOC107806588] [db_xref=GeneID:107806588] [protein=purple acid phosphatase 15 isoform X2] [protein_id=XP_016486261.1] [location=join(4913..5186,5842..6033,6675..7008,7251..7468,7643..7833,7950..8234,9043..9159,9735..9746)] [gbkey=CDS]
Sequence

ATGAAGTATTCTGGGGTGGTTGTTGTGTCAATCTTGGTTTGGTTTTTGGTTTTTGTTAGT
CTTGTTGAGGTTAATAAGGGTCAAATTCCAACCACAGTTGATGGACCTTTTAAGCCAGTG
ACTGTACCTTTGGACCAAAGTTTCAGGGGACATGCTGTTGATTTGCCAGACACTGATCCC
AGAGTTCAAAGGACTGTTAAAGGATTTGAGCCTGAACAGATATCTGTTTCCCTTTCTTCT
ACTTATGACTCTGTTTGGATTTCTTGGATTACAGGGGAATATCAAATTGGTGACAACATT
AAACCATTGGATCCAAGTAAAGTTGGCAGTGTTGTTCAATATGGGAAAGATAAATCCTCG
TTAAGGCACAAAGCAATTGGCGAGTCCCTTATTTATAATCAACTTTATCCATTTGAAGGA
CTTCAGAACTACACTTCTGGAATCATACACCATGTTCAACTTACAGGGTTGAAACCAAAT
ACATTATACTATTATCGATGTGGAGATCCTTCTATACCAGCTATGAGTACTATCTACCAT
TTCAAGACCATGCCTATTTCTTCTCCAAAGAGCTACCCAAAGAGAATAGCAATTGTAGGG
GACCTCGGTCTAACGTACAATACCACTTCCACTGTTAGCCATTTGATGGAGAACAATCCA
GATCTTGTTCTATTGGTTGGAGATGTCACATATGCTAATTTGTATCTCTCGAACGGAACT
GGTTCAGATTGCTATTCGTGCTCATTTAACGACACTCCGATACACGAGACCTATCAGCCT
CGGTGGGACTATTGGGGAAGATATATGCAACCGCTGGTGTCCAAAATTCCTATCATGGTG
GAGGAGGGGAACCATGAGATAGAAGAACAAGCTGAAAATCAGACATTTGCAGCCTATCGT
TCTCGCTTTGCATACCCATCAAAAGAAAGTGGATCATCCTCCCCATTTTACTATTCTTTT
AATGCGGGTGGCATACACTTCATCATGCTCGGAGGATATGTCGCCTATAATAAGTCAGAT
GATCAATACATGTGGTTGGAGAGGGACTTGGCTAATGTTGATAGGAGAGTTACTCCGTGG
CTGGTTGCCACTTGGCATCCACCTTGGTACTCTACTTACACGGCACACTATCGAGAAGCT
GAATGTATGAAGGTAGCGATGGAAGATTTGCTGTACGAGTATGGTGTCGATTTAGTCTTC
AATGGACATGTTCATGCTTATGAAAGGTCAAACAGAGTCTATAACTACACACTGGATCCT
TGTGGTCCAGTCTATATAACTGTCGGTGATGGTGGAAACCGCGAGAAGATGGCAATTGAA
CATGCTGATGAGCCAGGGAAATGTCCAAAACCAGATAGCACCCCGGACAAATTTATGGGC
GGATTCTGTGCCTATAATTTTACATCAGGTCCAGCTGCTGGTAACTTTTGTTGGGATCAA
CAACCTGATTATAGCGCATACCGAGAAAGTAGCTTCGGCCATGGAATACTAGAGGTGAAA
AATGAGACACATGCTCTATGGACATGGCATAGGAATCAGGATATGTACAATAAAGCTGGA
GATATAATTTACATAGTCAGGCAACCTGAGAAATGCCCTGTTAAACCTAAGGTTTTCTAT
TAA

Peptide Sequence

PEP ID

XP_016486261.1
PEP Infomation

PREDICTED: purple acid phosphatase 15 isoform X2 [Nicotiana tabacum]
Sequence

MKYSGVVVVSILVWFLVFVSLVEVNKGQIPTTVDGPFKPVTVPLDQSFRGHAVDLPDTDP
RVQRTVKGFEPEQISVSLSSTYDSVWISWITGEYQIGDNIKPLDPSKVGSVVQYGKDKSS
LRHKAIGESLIYNQLYPFEGLQNYTSGIIHHVQLTGLKPNTLYYYRCGDPSIPAMSTIYH
FKTMPISSPKSYPKRIAIVGDLGLTYNTTSTVSHLMENNPDLVLLVGDVTYANLYLSNGT
GSDCYSCSFNDTPIHETYQPRWDYWGRYMQPLVSKIPIMVEEGNHEIEEQAENQTFAAYR
SRFAYPSKESGSSSPFYYSFNAGGIHFIMLGGYVAYNKSDDQYMWLERDLANVDRRVTPW
LVATWHPPWYSTYTAHYREAECMKVAMEDLLYEYGVDLVFNGHVHAYERSNRVYNYTLDP
CGPVYITVGDGGNREKMAIEHADEPGKCPKPDSTPDKFMGGFCAYNFTSGPAAGNFCWDQ
QPDYSAYRESSFGHGILEVKNETHALWTWHRNQDMYNKAGDIIYIVRQPEKCPVKPKVFY

Transcript Sequence

Gene sequence data has not been registered.